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| Transfers |
 Inverness CT < > 420,000  Wigan Athletic |
| GXN | < | Ethan SUTHERLAND | LW | SCO | 44 | 0 | 25/04/06 (19) | 92 | | | Inverness CT | | | | | | | | 450 | | | |
 AA Gent 7,800,000 < > Wigan Athletic |
| HWJ | > | Matias FERNANDEZ PARDO | St | BEL | 61 | 88 | 03/02/05 (20) | 87 | 1.83 | 77 | Wigan Athletic | | 9960 | | | | 0 | 0 | 5885 | 1 | +2 | |
| Celtic 4,200,000 < > Wigan Athletic |
| RQF | > | Odsonne ÉDOUARD | St | FRA | 61 | 81 | 16/01/98 (27) | 89 | 1.87 | 83 | Wigan Athletic | | 9330 | | | | 0 | 0 | 3250 | 0 | +2 | |
| Ebbsfleet United < > Preston North End |
| XPJ | < | Alfie DORRINGTON | CB | ENG | 48 | 95 | 20/04/05 (20) | 87 | | | Preston North End | | 720 | | | | 0 | 0 | 490 | 0 | Y | (t.8, Ebbsfleet United) |
| Cambridge City < > 110,000 Charlton Athletic |
| MCG | < | Jake FORSTER-CASKEY | LM/CM | ENG | 45 | 14 | 25/04/94 (31) | 93 | 1.77 | 63 | Cambridge City | | | | | | | | 115 | | | |
| Watford < > Charlton Athletic |
| SEY | < | Ben AMOS | Gk | ENG | 41 | 93 | 10/04/90 (35) | 89 | 1.80 | 69 | Watford | | 530 | | | | 1 | 0 | F/t | 0 | +1 | |
| Tottenham Hotspur 5,000,000 < > Charlton Athletic |
| OPA | > | Bruno DURDOV | RW | CRO | 56 | 68 | 11/12/07 (18) | 88 | | | Charlton Athletic | | 4180 | | | | 0 | 0 | 2885 | 0 | +4 | |
 NAC 3,100,000 < > Coventry City |
| YJT | > | Ezechiel BANZUZI | CM/AM | NED | 58 | 87 | 16/02/05 (20) | 90 | 1.91 | 80 | Coventry City | | 5380 | | | | 0 | 0 | 3275 | 0 | +4 | |
| AOP | < | Sam McCALLUM | LB | ENG | 55 | 1 | 02/09/00 (25) | 93 | | | NAC | | | | | | | | 865 | | | |
| TLC | < | Rhys NORRINGTON-DAVIES | LB | WAL | 54 | 8 | 22/04/99 (26) | 88 | 1.70 | 60 | NAC | | | | | | | | 690 | | | |
 Qabala 2,000,000 < > Coventry City |
| XHP | > | Djeidi GASSAMA | CS | FRA | 56 | 77 | 10/09/03 (22) | 86 | 1.78 | 70 | Coventry City | | 4040 | | | | 0 | 0 | 2345 | 0 | +2 | |
| VEX | < | Jamie ALLEN | CM | ENG | 53 | 9 | 29/01/95 (30) | 92 | 1.80 | 72 | Qabala | | | | | | | | 645 | | | |
| SBM | < | Gervane KASTANEER | St | CUW | 51 | 1 | 09/06/96 (29) | 91 | 1.85 | 86 | Qabala | | | | | | | | 600 | | | |
| Sunderland 5,000,000 < > Coventry City |
| DCQ | > | Alan Agustín MATTURRO Romero | CB | URU | 58 | 94 | 11/10/04 (21) | 83 | 1.89 | 74 | Coventry City | | 5480 | | | | 0 | 0 | 2030 | 0 | +4 | |
| LYS | > | Román Gabriel VEGA | LB | ARG | 59 | 96 | 01/01/04 (21) | 85 | 1.77 | 74 | Coventry City | | 6070 | | | | 0 | 0 | 2350 | 0 | +4 | |
 Osasuna 700,000 < > Shrewsbury Town |
| AFZ | > | Jay ROBINSON | CS | ENG | 43 | 92 | 15/03/07 (18) | 88 | | | Shrewsbury Town | | 320 | | | | 0 | 0 | 505 | 0 | Y | |
| AFC Fylde 910,000 < > Shrewsbury Town |
| QSM | > | Thierry SMALL | LB | ENG | 51 | 79 | 01/08/04 (21) | 90 | | | Shrewsbury Town | | 1680 | | | | 0 | 0 | 710 | 0 | +2 | |
| Stockport County 5,400,000 < > Blackpool |
| SWO | > | Eliezer MAYENDA | CS | ESP | 58 | 96 | 08/05/05 (20) | 90 | 1.80 | 75 | Blackpool | 7.24 | 5850 | | | | 3 | 0 | 3810 | 28 | +4 | |
 1.FC Nürnberg 3,300,000 < > Blackpool |
| DPH | > | Finn JELTSCH | CB | GER | 58 | 88 | 17/07/06 (19) | 90 | 1.88 | 78 | Blackpool | | 5790 | | | | 0 | 0 | 2420 | 0 | +4 | |
| Harrogate Town 3,300,000 < > Blackpool |
| WIZ | > | Jaden PHILOGENE | W | ENG | 58 | 97 | 08/02/02 (23) | 94 | 1.81 | 67 | Blackpool | 6.90 | 5630 | | | | 0 | 0 | 2420 | 16 | +3 | |
| Wrexham < > 750,000 Rochdale |
| SCD | < | Femi SERIKI | RWB/RW | ENG | 53 | 97 | 28/04/02 (23) | 92 | | | Wrexham | 6.91 | 2720 | | | | 1 | 0 | 770 | 0 | +1 | |
| Chelsea 55,000 < > Rochdale |
| PCG | > | Cathal HEFFERNAN | CB | IRL | 37 | 95 | 27/04/05 (20) | 91 | | | Rochdale | | 290 | | | | 0 | 0 | 40 | 0 | +4 | |
 GKS Katowice < > 480,000 Sheffield Weds. |
| DZI | < | Martin VETKAL | DM/CM | EST | 48 | 14 | 21/02/04 (21) | 85 | 1.81 | 71 | GKS Katowice | | | | | | | | 440 | | | |
 Monza < > Sheffield Weds. |
| HUR | < | Kian BEST | LWB | ENG | 49 | 94 | 27/08/05 (20) | 85 | | | Sheffield Weds. | | 890 | | | | 0 | 0 | 580 | 0 | Y | (t.8, Monza) |
| Crystal Palace < > 1,000,000 Accrington Stan. |
| JFN | < | Sam FIELD | DM | ENG | 57 | 90 | 08/05/98 (27) | 91 | 1.85 | 73 | Crystal Palace | | 5870 | | | | 0 | 0 | 1040 | 0 | +2 | |
| Elche < > 2,470,000 Accrington Stan. |
| GIH | < | Ben BRERETON DÍAZ | St | CHI | 60 | 1 | 18/04/99 (26) | 91 | 1.85 | 75 | Elche | | | | | | | | 2985 | | | |
| Bayer Leverkusen 2,600,000 < > Manchester City |
| BWE | > | Edmond Faycial TAPSOBA | CB | BFA | 67 | 88 | 02/02/99 (26) | 85 | 1.90 | 80 | Manchester City | | 34560 | | | | 0 | 0 | 4780 | 0 | +1 | |
| XXM | < | TOMÁS Lemos ARAÚJO | CB | POR | 64 | 13 | 16/05/02 (23) | 91 | 1.87 | 81 | Bayer Leverkusen | | | | | | | | 3925 | | | |
| Watford 2,200,000 < > Burton Albion |
| IFK | > | Assan OUEDRAOGO | CM | GER | 52 | 99 | 09/05/06 (19) | 83 | 1.91 | 84 | Burton Albion | | 2270 | | | | 0 | 0 | 1490 | 0 | +1 | |
| Jong Ajax 700,000 < > Burton Albion |
| CRF | > | Emre ÜNÜVAR | St | NED | 41 | 93 | 18/03/08 (17) | 91 | | | Burton Albion | | 220 | | | | 0 | 0 | 410 | 0 | Y | |
| Ross County < > 480,000 Burton Albion |
| NMB | < | George LONG | Gk | ENG | 53 | 1 | 05/11/93 (32) | 91 | 1.82 | 78 | Ross County | | | | | | | | 385 | | | |
| Colchester United 12,100,000 < > Arsenal |
| AFR | > | Noni MADUEKE | W | ENG | 65 | 99 | 10/03/02 (23) | 93 | 1.81 | 70 | Arsenal | 6.71 | 21400 | | | | 10 | 0 | 6680 | 9 | +3 | |
| Cartagena < > 3,940,000 Notts County |
| WXS | < | ISAAC Romero Bernal | St | ESP | 62 | 15 | 18/05/00 (25) | 91 | 1.84 | 70 | Cartagena | | | | | | | | 4245 | | | |
| Racing Genk 3,895,000 < > Bradford City |
| QBD | > | Daniel MUÑOZ Mejía | RWB | COL | 65 | 75 | 26/05/96 (29) | 89 | 1.83 | 75 | Bradford City | | 21400 | | | | 0 | 0 | 2975 | 1 | +1 | |
| Lierse 2,750,000 < > Newcastle United |
| RUU | > | Wout FAES | CB/RB | BEL | 62 | 77 | 03/04/98 (27) | 89 | 1.85 | 84 | Newcastle United | | 10760 | | | | 0 | 0 | 2200 | 0 | +1 | |
| Talleres 580,000 < > Oxford United |
| EHO | > | Jack ROBINSON | LB/CB | ENG | 56 | 94 | 01/09/93 (32) | 94 | 1.80 | 67 | Oxford United | | 4330 | | | | 0 | 0 | 475 | 0 | +1 | |
| FC Utrecht 790,000 < > Wrexham |
| HNK | > | Hidde TER AVEST | RB/CB | NED | 54 | 86 | 20/05/97 (28) | 90 | 1.81 | 75 | Wrexham | | 2700 | | | | 0 | 0 | 595 | 0 | +1 | |
| Loan/transfer listed |
| WZV | - | Murphy COOPER | Gk | ENG | 47 | 95 | 27/12/01 (23) | 91 | | | Rochdale | | 990 | | | T | 0 | 0 | 355 | 0 | | |
| ZEK | - | James BALL | CM | ENG | 40 | 93 | 01/12/95 (30) | 86 | 1.87 | 80 | Rochdale | | 390 | | | T | 0 | 0 | 10 | 0 | | |
| LUM | - | Tom FELLOWS | RW | ENG | 58 | 90 | 25/07/03 (22) | 92 | 1.83 | 67 | Rochdale | 7.12 | 5430 | | | T | 1 | 0 | 2705 | 1 | | |
| RVX | - | Jack PAYNE | CM | ENG | 46 | 95 | 25/10/94 (31) | 92 | 1.65 | 60 | Rochdale | | 810 | | | T | 2 | 0 | 150 | 0 | | |
| VCL | - | Mahamadou SUSOHO | DM | ESP | 45 | 93 | 20/01/05 (20) | 87 | | | Exeter City | | 430 | | | T | 0 | 0 | 295 | 0 | Y | |
| GZU | - | Predrag RAJKOVIC | Gk | SRB | 63 | 94 | 31/10/95 (30) | 86 | 1.92 | 88 | Accrington Stan. | | 16380 | | | T | 2 | 0 | 2135 | 0 | | |
| RIE | - | Ross SYKES | CB | ENG | 60 | 95 | 26/03/99 (26) | 90 | 1.96 | 73 | Accrington Stan. | | 6600 | | | T | 0 | 0 | 1745 | 0 | | |
| XUV | - | Gabriel OSHO | CB/RB | NGA | 61 | 95 | 14/08/98 (27) | 90 | 1.85 | 70 | Accrington Stan. | | 10320 | | | T | 0 | 0 | 1900 | 0 | | |
| DBN | - | SERGI Domínguez Viloria | CB | ESP | 50/54 | 94 | 01/04/05 (20) | 73 | 1.88 | 78 | Accrington Stan. | | 1150 | | | T | 0 | 0 | 1240 | 0 | Y | |
| ESI | - | SON Heung-min | LW/St | KOR | 66 | 59 | 08/07/92 (33) | 93 | 1.83 | 78 | Tottenham Hotspur | | 26420 | 7 | | T | 3 | 0 | 2430 | 2 | +1 | |
| Released |
| TTP | 16 | Ro-Shaun WILLIAMS | CB | ENG | 46 | 1 | 03/09/98 (27) | 95 | 1.88 | 80 | (no club) | | | | | | | | 135 | | | |
| FKJ | 16 | Mamadou 'Obbi' OULARÉ | CS | BEL | 47 | 14 | 08/01/96 (29) | 92 | 1.96 | 94 | Kickers Emden | | | | | | | | 295 | | | |
| QRY | 16 | Rayhaan TULLOCH | W | ENG | 40 | 12 | 20/01/01 (24) | 87 | 1.75 | 65 | Portadown | | | | | | | | 85 | | | |
| Loan callbacks |
| YFT | - | Stefanos TZIMAS | CS | GRE | 54 | 97 | 06/01/06 (19) | 93 | 1.84 | 77 | Port Vale | 6.89 | 1480 | | | | 1 | 0 | 2320 | 11 | Y | |
