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| Transfers |
 Atlético Madrid 2,000,000 < >  Everton |
| APM | < | Tariq LAMPTEY | RWB/RW | GHA | 62 | 1 | 30/09/00 (23) | 92 | 1.64 | 55 | Atlético Madrid | | | | | | | | 2950 | | | |
| NKP | > | Antonee ROBINSON | LB | USA | 64 | 75 | 08/08/97 (26) | 93 | 1.83 | 73 | Everton | | 18780 | | | | 0 | 0 | 3125 | 0 | +2 | |
| 160,000 < > Sheffield Weds. |
| PTC | > | Ollie SCARLES | DM/CB | ENG | 39 | 94 | 12/12/05 (18) | 94 | | | Sheffield Weds. | | 190 | | | | 0 | 0 | 120 | 0 | Y | |
 Boca Juniors 250,000 < > Sheffield Weds. |
| YMX | > | Aaron ANSELMINO | CB | ARG | 41 | 96 | 29/04/05 (19) | 89 | | | Sheffield Weds. | | 250 | | | | 0 | 0 | 160 | 0 | Y | |
 Kustosija 800,000 < > Sheffield Weds. |
| EXV | > | Mikayil Ngor FAYE | CB/LB | SEN | 48 | 68 | 14/07/04 (19) | 89 | | | Sheffield Weds. | | 750 | | | | 0 | 0 | 545 | 0 | Y | |
 Antwerp 2,300,000 < > Port Vale |
| OEO | > | Zeno DEBAST | CB | BEL | 63 | 87 | 24/10/03 (20) | 90 | 1.88 | 73 | Port Vale | | 7380 | | | | 0 | 0 | 4545 | 0 | Y | |
| QEF | < | JOHN KENNEDY Batista de Souza | St | BRA | 50/59 | 3 | 18/05/02 (21) | 65 | 1.73 | 71 | Antwerp | | | | | | | | 4020 | | | |
 St.Pauli < > 2,540,000 Port Vale |
| RDD | < | Anton KADE | RM | GER | 51/57 | 15 | 17/01/04 (20) | 70 | 1.85 | 72 | St.Pauli | | | | | | | | 2830 | | | |
 Raith Rovers 850,000 < > Wigan Athletic |
| JNH | > | Daniel ARMSTRONG | LW | SCO | 51 | 97 | 11/10/97 (26) | 96 | 1.75 | 64 | Wigan Athletic | | 2110 | | | | 0 | 0 | 640 | 0 | +4 | |
| Ross County 950,000 < > Wigan Athletic |
| WJY | > | Blair SPITTAL | RWB/RM | SCO | 55 | 94 | 19/12/95 (28) | 93 | 1.83 | 74 | Wigan Athletic | | 3070 | | | | 0 | 0 | 705 | 0 | +4 | |
 Dolgoprudnyi < > 6,250,000 Oldham Athletic |
| BNW | < | Arsen ZAKHARYAN | AM/W | RUS | 61 | 1 | 26/05/03 (20) | 86 | 1.80 | 68 | Dolgoprudnyi | | | | | | | | 5045 | | | |
| 880,000 < > Oldham Athletic |
| XIU | > | Nelson ABBEY | CB/LB | ENG | 50 | 88 | 28/08/03 (20) | 92 | | | Oldham Athletic | | 1620 | | | | 0 | 0 | 675 | 0 | +1 | |
| Real Madrid 4,500,000 < > Southampton |
| LKL | > | Andriy LUNIN | Gk | UKR | 63 | 90 | 11/02/99 (25) | 86 | 1.91 | 80 | Southampton | | 17040 | | | | 0 | 0 | 3285 | 0 | +2 | |
| 100,000 < > Southampton |
| CYT | > | Trevan SANUSI | LW | ENG | 38 | 95 | 25/04/07 (17) | 94 | | | Southampton | | 170 | | | | 0 | 0 | 205 | 0 | Y | |
| 80,000 < > Southampton |
| BWC | > | Ollie HARRISON | CM | ENG | 37 | 76 | 07/08/07 (16) | 95 | | | Southampton | | 150 | | | | 0 | 0 | 195 | 0 | Y | |
| Rotherham United < > 1,410,000 Forest Green |
| LYF | < | Tim IROEGBUNAM | CM | ENG | 54 | 94 | 12/08/02 (21) | 92 | | | Rotherham United | | 3090 | | | | 0 | 0 | 1660 | 0 | +1 | |
 Bologna < > Carlisle United |
| FKQ | < | Zlatan IBRAHIMOVIC | CS | SWE | 64 | 10 | 03/10/81 (42) | 92 | 1.92 | 84 | Bologna | | | | | | | | F/t | | | |
| Cheltenham Town < > Liverpool |
| FYE | < | Sepp VAN DEN BERG | CB | NED | 59/60 | 92 | 20/12/01 (22) | 78 | 1.90 | 78 | Liverpool | | 7000 | | | | 2 | 0 | 2460 | 0 | | (t.33, Cheltenham Town) |
| MMI | < | Luka SUCIC | AM | CRO | 61 | 92 | 08/09/02 (21) | 90 | 1.85 | 69 | Liverpool | | 11120 | | | | 0 | 0 | 4615 | 0 | +1 | (t.33, Cheltenham Town) |
| Portsmouth < > Liverpool |
| THD | < | Roko SIMIC | CS | CRO | 59 | 95 | 10/09/03 (20) | 90 | | | Liverpool | | 7700 | | | | 0 | 0 | 4405 | 0 | +2 | (t.33, Portsmouth) |
| KRK | < | Roony BARDGHJI | RW/AM | SWE | 58 | 95 | 15/11/05 (18) | 81 | | | Liverpool | | 4140 | | | | 0 | 0 | 3850 | 0 | Y | (t.33, Portsmouth) |
| QPR < > Liverpool |
| KCT | < | Samuel Omorodion Aghehowa, SAMU | CS | ESP | 59 | 95 | 05/05/04 (19) | 86 | | | Liverpool | | 8940 | 23 | | | 0 | 0 | 4790 | 0 | +2 | (t.33, QPR) |
| Salford City 3,300,000 < > Notts County |
| HCY | > | Morgan ROGERS | WS | ENG | 56 | 92 | 26/07/02 (21) | 95 | | | Notts County | | 3750 | | | | 2 | 0 | 2595 | 1 | +3 | |
| Real Salt Lake < > 1,050,000 Sunderland |
| GWY | < | Jewison Francisco BENNETTE Villegas | LW | CRC | 50 | 12 | 15/06/04 (19) | 82 | 1.75 | 68 | Real Salt Lake | | | | | | | | 1110 | | | |
| 410,000 < > Fulham |
| OLR | > | Sebastian REVAN | LB | ENG | 50 | 70 | 14/07/03 (20) | 96 | | | Fulham | | 1760 | | | | 0 | 0 | 675 | 0 | | |
| 880,000 < > Fulham |
| WIA | > | Alen HALILOVIC | AM/RW | CRO | 57 | 76 | 18/06/96 (27) | 88 | 1.70 | 65 | Fulham | | 4900 | | | | 0 | 0 | 1535 | 0 | | |
| Confiança 1,755,000 < > Bristol Rovers |
| ISK | > | WESLEY Moraes Ferreira da Silva | CS | BRA | 55 | 94 | 26/11/96 (27) | 90 | 1.90 | 93 | Bristol Rovers | | 3270 | | | | 0 | 0 | 1320 | 0 | +1 | |
| Loan/transfer listed |
| TAR | - | Jaidon ANTHONY | W | ENG | 59 | 97 | 01/12/99 (24) | 93 | | | Exeter City | | 6640 | | | T | 0 | 0 | 2485 | 0 | | |
| UDD | - | Shola SHORETIRE | W/AM | ENG | 47 | 94 | 02/02/04 (20) | 89 | | | Exeter City | | 1230 | | | T | 0 | 0 | 645 | 0 | +2 | |
| LTS | - | Ferran JUTGLÀ Blanch | W/CS | ESP | 61 | 99 | 01/02/99 (25) | 90 | 1.75 | 77 | Exeter City | 6.88 | 9180 | | | T | 1 | 0 | 3150 | 1 | +2 | |
| LZI | - | Ebere 'Paul' ONUACHU | CS | NGA | 60 | 98 | 28/05/94 (29) | 95 | 2.01 | 84 | Exeter City | | 8510 | | | T | 2 | 0 | 2445 | 1 | +1 | |
| AZG | - | Yasser LAROUCI | LWB | ALG | 60 | 90 | 01/01/01 (23) | 93 | | | Exeter City | | 7670 | | | T | 0 | 0 | 2210 | 0 | +2 | |
| Released |
| ENR | 16 | Connor OGILVIE | CB/LB | ENG | 48 | 10 | 14/02/96 (28) | 92 | 1.82 | 73 | Bury | | | | | | | | 195 | | | |
| RCJ | 25+ | Aden BALDWIN | CB | ENG | 44 | 4 | 10/06/97 (26) | 92 | 1.83 | 70 | (no club) | | | | | | | | 90 | | | |
