Crowd | | | Opponents |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | 35,918 | A | 4 (1) | Carlisle United | L | 0-4 | 0-1 |
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 |
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| 26,723 | H | 4 (2) | Club Brugge | W | 4-1 | 1-1 | - -
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| 2 | 31 | 4 | 5 | 6 | 8 | 7 | 9 | 101 | 111 | 1 |
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| 27,570 | H | 4 (4) | Atlético Madrid | L | 0-3 | 0-2 | 15
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 9 | 10 | 11 | 1 | 4 | 4 |
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| 22,353 | H | IS 1 | Lyon | L | 1-3 | 1-0 |
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| 2 | 3 |
| 5 | 6 | 81 | 10 | 9 | 4 | 11 | 1 |
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| 7 | 10 |
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| 16,839 | H | WCT 1 {1} | Atlético-PR | W | 3-2 | 1-0 |
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| 2 | 31 |
| 5 | 6 | 8 | 10 | 91 | 7 | 111 | 1 | 4 |
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| 2 |
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| 14,092 | A | 4 (5) | Besiktas | L | 0-3 | 0-2 | 20
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 9 | 10 | 11 | 1 | 4 | 4 |
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| 9,548 | A | WCT 1 | Atlético-PR | L | 0-2 | 0-1 |
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 9 | 10 | 11 | 1 | 4 | 4 |
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| 12,484 | A | 4 (6) | Belenenses | L | 0-3 | 0-2 | 21
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 9 | 10 | 11 | 1 | 4 | 4 |
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| 22,636 | H | 4 (7) | Mallorca | L | 0-1 | 0-1 | 21
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 9 | 10 | 11 | 1 | 4 | 4 |
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| 40,401 | A | 4 (3) | Shakhtar | X | 1-1 | 1-1 | - -
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| 2 | 3 |
| 5 | 6 | 8 | 7 | 91 | 10 | 11 | 1 | 4 |
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| 21,797 | H | 4 (8) | Hajduk Split | L | 0-3 | 0-2 | 0
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| 2 | 3 | 4 |
| 5 | 7 | 8 | 9 |
| 11 | 1 |
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| 6 | 10 |
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| 46,686 | A | 4 (9) | Inter | L | 0-2 | 0-2 | 21
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| 2 | 3 | 4 |
| 5 | 7 | 8 | 9 |
| 11 | 1 |
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| 6 | 10 |
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| 23,865 | H | 4 (10) | Olympiakos | L | 1-3 | 1-2 | 21
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| 2 | 3 | 4 |
| 5 | 7 | 8 | 91 |
| 11 | 1 |
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| 6 | 10 |
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| 26,058 | A | 4 (11) | Juventus | L | 1-3 | 1-3 | 21
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| 2 | 3 | 4 |
| 5 | 7 | 81 | 9 |
| 11 | 1 |
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| 6 | 10 |
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| 24,950 | A | 4 (12) | Auxerre | X | 1-1 | 0-0 | 21
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| 2 | 3 | 4 |
| 5 | 7 | 8 | 9 |
| 11 | 1 |
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| 6 | 101 |
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| 16,482 | H | 4 (13) | Lyon | X | 2-2 | 1-2 | 21
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| 21 | 3 | 4 |
| 5 | 7 | 8 | 91 |
| 11 | 1 |
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| 6 | 10 |
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| 36,698 | A | 4 (14) | Boca Juniors | L | 2-4 | 2-2 | 21
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| 2 | 3 | 4 |
| 5 | 7 | 81 | 91 |
| 11 | 1 |
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| 6 | 10 |
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| 15,707 | H | 4 (15) | FC Twente | W | 3-2 | 1-0 | 21
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| 2 | 31 | 4 |
| 5 | 7 | 81 | 91 |
| 11 | 1 |
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| 10 |
| 6 | 10 |
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| 36,491 | A | 4 (16) | Sampdoria | L | 0-2 | 0-2 | 20
| 1 |
| 3 | 4 | 5 | 6 | 8 |
| 9 |
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| 2 |
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| 7 | 10 | 11 |
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| 21,507 | A | 4 (17) | Genoa | L | 1-4 | 1-3 | 21
| 1 |
| 3 | 4 | 5 | 6 | 71 | 8 | 9 |
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| 10 | 11 |
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| 21,482 | H | 4 (18) | Hibernian | W | 2-1 | 2-1 | 0
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| 3 | 4 | 5 | 6 | 71 | 81 | 9 | 2 |
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| 10 | 11 |
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| 17,543 | A | 4 (19) | Grasshoppers | L | 2-4 | 1-3 | 20
| 1 |
| 3 | 4 | 5 | 6 | 7 | 81 | 9 |
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| 2 |
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| 10 | 111 |
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| 25,955 | H | 4 (20) | SV Werder Bremen | L | 0-3 | 0-2 | 21
| 1 |
| 3 | 4 |
| 5 | 8 |
| 9 | 7 |
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| 2 |
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| 10 |
| 11 |
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| 15,808 | A | 4 (21) | Lorient | L | 1-2 | 0-2 | 21
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| 8 | 9 | 4 |
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| 6 | 2 |
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| 101 |
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| 7 | 11 |
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| 24,727 | H | 4 (22) | Carlisle United | L | 0-1 | 0-0 | 21
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| 8 | 9 | 4 |
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| 6 | 2 |
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| 10 |
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| 7 | 11 |
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| 29,036 | A | 4 (23) | Club Brugge | L | 0-5 | 0-2 | 21
| 1 |
| 3 |
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| 5 |
| 8 | 9 | 4 |
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| 6 | 2 |
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| 10 |
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| 7 | 11 |
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| 24,180 | H | 4 (24) | Shakhtar | X | 2-2 | 1-2 | 22
| 1 | 2 | 3 | 4 | 5 | 6 | 8 |
| 10 | 7 |
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| 7 |
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| 111 |
| 91 |
| 17,979 | H | EC 1 | Spartak | L | 0-4 | 0-3 |
| 1 | 2 | 3 | 4 | 5 | 6 | 8 |
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| 7 |
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| 10 | 11 |
| 9 |
| 21,527 | H | 4 (26) | Besiktas | L | 0-1 | 0-1 | 22
| 1 | 2 | 3 | 4 | 5 | 6 | 8 |
| 10 | 7 |
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| 11 |
| 9 |
| 19,927 | H | 4 (27) | Belenenses | L | 1-2 | 1-0 | 22
| 1 | 2 | 3 | 4 | 5 | 6 | 8 |
| 10 | 7 |
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| 7 |
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| 11 |
| 91 |
| 23,084 | A | 4 (28) | Mallorca | L | 0-2 | 0-1 | 22
| 1 | 2 | 3 | 4 | 5 | 6 | 8 |
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| 7 | 10 |
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| 9 |
| 11 |
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| 31,538 | A | 4 (29) | Hajduk Split | L | 0-3 | 0-2 | 22
| 1 | 2 | 3 | 4 | 5 | 6 |
| 8 |
| 7 |
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| 9 | 10 | 11 |
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| 19,466 | H | 4 (30) | Inter | L | 0-3 | 0-2 | 22
| 1 |
| 3 | 4 | 5 |
| 8 |
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| 7 | 6 | 2 |
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| 10 | 11 | 9 |
| 28,359 | A | 4 (31) | Olympiakos | L | 2-4 | 1-3 | 22
| 1 |
| 3 | 7 | 5 | 9 | 81 |
| 10 |
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| 4 | 6 | 2 |
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| 11 | 91 |
| 17,785 | H | 4 (32) | Juventus | X | 2-2 | 1-1 | 22
| 1 |
| 3 | 7 | 5 |
| 8 |
| 10 |
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| 41 | 6 | 2b |
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| 11b | 91 |
| 20,675 | H | 4 (33) | Auxerre | L | 0-1 | 0-0 | 22
| 1 |
| 3 | 7 | 5 | 9 | 8 |
| 10 |
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| 4 | 6 | 2 |
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| 11 | 9 |
| 25,688 | A | 4 (34) | Lyon | L | 2-3 | 2-2 | 22
| 1 |
| 31 | 7 | 5 | 9 | 81 |
| 10 |
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| 4 | 6 | 2 |
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| 11 | 9 |
| 17,393 | H | 4 (35) | Boca Juniors | L | 3-4 | 2-3 | 22
| 1 |
| 3 | 7 | 5 | 9 | 81 |
| 10 |
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| 4 | 6 | 2 |
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| 11 | 92 |
| 41,655 | A | 4 (25) | Atlético Madrid | W | 2-1 | 2-0 | 22
| 1 |
| 3 | 7 | 5 |
| 8 |
| 10 |
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| 4 | 6 | 2 |
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| 111 | 91 |
| 20,025 | A | 4 (36) | FC Twente | L | 1-3 | 1-2 | 22
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| 2 | 3 | 4 |
| 5 | 8 |
| 10 |
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| 6 |
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| 7 | 111 | 9 | 1 | 18,834 | H | 4 (37) | Sampdoria | L | 0-2 | 0-1 | 22
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| 2 | 3 | 4 |
| 5 | 8 |
| 10 |
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| 6 |
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| 7 | 11 | 9 | 1 | 19,207 | H | 4 (38) | Genoa | W | 2-1 | 1-1 | 22
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| 2 | 3 | 4 | 6 | 5 |
| 8 |
| 11 |
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| 7 |
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| 10 |
| 11 | 92 | 1 | 17,617 | A | 4 (39) | Hibernian | W | 2-1 | 1-0 | 22
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| 2 | 3 | 4 | 5 | 6 |
| 82 | 10 |
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| 7 |
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| 11 | 9 | 1 | 26,840 | H | 4 (40) | Grasshoppers | L | 2-3 | 2-1 | 22
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| 2 | 3 | 4 | 5 | 6 |
| 81 | 10 |
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| 7 |
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| 10 | 11 | 91 | 1 | 42,339 | A | 4 (41) | SV Werder Bremen | L | 0-1 | 0-0 | 22
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| 2 | 3 | 4 | 5 | 6 |
| 8 | 10 |
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| 7 |
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| 10 | 11 | 9 | 1 | 22,604 | H | 4 (42) | Lorient | L | 0-3 | 0-1 | 22
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| 2 | 3 |
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| 10 | 7 | 11 | 9 | 1 | Key: 4 - Division 4, {#} - leg number and (#) - league round number. |
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