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| Transfers |
 Angers 1,600,000 < >  Doncaster Rovers |
| EBL | > | Marius COURCOUL | DM | FRA | 52 | 61 | 01/01/07 (18) | 89 | 1.82 | 75 | Doncaster Rovers | | 2080 | | | | 0 | 0 | 1095 | 0 | +2 | |
 Kashima Antlers < > 1,310,000 Doncaster Rovers |
| FFH | < | Yu HIRAKAWA | W | JPN | 55 | 1 | 03/01/01 (24) | 91 | 1.71 | 68 | Kashima Antlers | | | | | | | | 1365 | | | |
 Fenerbahçe < > Stoke City |
| RGL | < | SEMIH Kiliçsoy | CS/LW | TUR | 61 | 88 | 15/08/05 (20) | 93 | 1.78 | 75 | Stoke City | 6.88 | 9120 | | | | 5 | 0 | 5885 | 15 | +1 | (t.23, Fenerbahçe) |
 Malmö FF < > Stoke City |
| EAB | < | Lucas BERGVALL | CM | SWE | 61 | 95 | 02/02/06 (19) | 91 | 1.86 | 74 | Stoke City | 6.75 | 10320 | | | | 0 | 0 | 5480 | 0 | +4 | (t.5, Malmö FF) |
 Sporting < > Sunderland |
| OGX | < | Karim KONATÉ | St | CIV | 60/61 | 93 | 21/03/04 (21) | 79 | 1.78 | 68 | Sunderland | 6.25 | 11120 | | | | 0 | 0 | 5375 | 3 | +1 | (t.11, Sporting) |
 Bahia < > Sunderland |
| NEF | < | LORRAN Lucas Pereira de Sousa | AM/W | BRA | 49/52 | 89 | 04/07/06 (19) | 75 | | | Sunderland | | 1910 | | | | 0 | 0 | 1490 | 0 | Y | (t.5, Bahia) |
 San Jose < > 3,200,000 Crystal Palace |
| BWA | < | Chris RICHARDS | CB | USA | 63 | 13 | 28/03/00 (25) | 94 | 1.88 | 82 | San Jose | | | | | | | | 2865 | | | |
 VfL Bochum < > Leeds United |
| JFQ | < | Leny YORO | CB | FRA | 63 | 95 | 13/11/05 (19) | 90 | 1.90 | 73 | Leeds United | 6.23 | 8690 | | | | 2 | 0 | 4930 | 2 | Y | (t.42, VfL Bochum) |
| Stafford Rangers < > 130,000 Sheffield Weds. |
| UNN | < | Jaden BROWN | LB/CB | ENG | 46 | 1 | 24/01/99 (26) | 94 | 1.75 | 72 | Stafford Rangers | | | | | | | | 155 | | | |
| Paris SG 9,900,000 < > Sheffield Weds. |
| TCD | > | Ibrahim MBAYE | RW | FRA | 52 | 90 | 24/01/08 (17) | 91 | 1.85 | 65 | Sheffield Weds. | | 1290 | | | | 0 | 0 | 1750 | 0 | Y | |
| YNB | > | Senny MAYULU | CM | FRA | 61 | 82 | 17/05/06 (19) | 84 | 1.83 | 69 | Sheffield Weds. | | 10320 | | | | 0 | 0 | 5480 | 0 | +1 | |
| 510,000 < > Cambridge United |
| QLI | > | Christian Chikwado NWACHUKWU | RW/AM | NGA | 49 | 93 | 27/12/05 (19) | 94 | 1.69 | 67 | Cambridge United | | 1290 | | | | 0 | 0 | 960 | 0 | +1 | |
| 800,000 < > Cambridge United |
| IYS | > | Sam AMO-AMEYAW | LW/AM | ENG | 52 | 78 | 18/07/06 (19) | 96 | | | Cambridge United | | 2020 | | | | 0 | 0 | 1490 | 0 | +1 | |
| 800,000 < > WBA |
| IYL | < | George CAMPBELL | CB | USA | 57 | 87 | 22/06/01 (24) | 93 | 1.88 | 79 | WBA | | 5520 | | | | 0 | 0 | 1250 | 0 | +1 | |
| 1,200,000 < > Swansea City |
| YXH | < | Melker WIDELL | CM/W | SWE | 56 | 97 | 19/04/02 (23) | 93 | | | Swansea City | | 4500 | | | | 0 | 0 | 1800 | 0 | +1 | |
| Karlsruher SC 1,305,000 < > Wigan Athletic |
| COM | > | Max WEISS | Gk | GER | 53 | 77 | 15/06/04 (21) | 93 | 1.90 | 84 | Wigan Athletic | | 2290 | | | | 0 | 0 | 1080 | 0 | +1 | |
 SC Heerenveen 1,290,000 < > Yeovil Town |
| MZX | > | Denzel HALL | RB/CB | NED | 56 | 81 | 22/05/01 (24) | 91 | 1.80 | 74 | Yeovil Town | | 4120 | | | | 0 | 0 | 1075 | 0 | +1 | |
| Released |
| USY | 25+ | Cameron DAWSON | Gk | ENG | 48 | 0 | 07/07/95 (30) | 95 | 1.82 | 69 | Charleville | | | | | | | | 170 | | | |
| Loan callbacks |
| ECQ | 1 | Fabio MIRETTI | AM | ITA | 63 | 98 | 03/08/03 (22) | 90 | | | Sunderland | 6.50 | 14240 | | | | 1 | 0 | 5580 | 2 | +4 | |
| YEQ | 1 | Lewis MILEY | CM | ENG | 60 | 99 | 01/05/06 (19) | 93 | | | Stoke City | 6.94 | 9690 | | | | 3 | 1 | 4750 | 0 | +1 | |
